rs47741913 SNP Detail

Summary

• ID
  rs47741913
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141149610 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCATATGTG GCTGTCAAGG
  TAGACCTGGC CACCAAGACA GATGTGGCTA CGATATAGGT GGGCTACCTG GGACCCTAGG
  GGTGAGATGT GAATCAAATA GTCTCATATG GCCAGTGTCA TAGCGGGAGC CCTGGAGGGC
  TGGCGCTGGG ACTGAGGGGC GGCTGGCCCT TCAGAGCTTC CAGGTCAAAT TGCTAAAGGG
  R
  GAACTTGTCT GCGTAGACAC AGATTGAGGT GCGTGAGGCT CACCTCACTC CATCCCTCGG
  GGACAAGGTA GGCTGCAAAA GTGAGGCGAG GGGCTGTTGT CTGGGAGAGT CACTCATTTC
  CCCAAGAGAA GAGCAGAGAC CCTGAGGGTC TGAGGCTCCG GCTTGCCTGG TGCCCAGCTT
  ATATAGCAGC CTTGCCCACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147736034	ENSMUSSNP16355	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs47741913					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141149610 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15227	CpG island 15227	459 bp distal
Gm70184	predicted gene, 70184	1240 bp upstream
Hspb7	heat shock protein family, member 7 (cardiovascular)	within coordinates
Tssr40053	transcription start site region 40053	1501 bp downstream
Tssr40054	transcription start site region 40054	623 bp downstream
Tssr40055	transcription start site region 40055	610 bp downstream
Tssr40056	transcription start site region 40056	589 bp downstream
Tssr40057	transcription start site region 40057	528 bp downstream
Tssr40058	transcription start site region 40058	501 bp downstream
Tssr40059	transcription start site region 40059	477 bp downstream
Tssr40060	transcription start site region 40060	417 bp downstream
Tssr40061	transcription start site region 40061	407 bp downstream
Tssr40062	transcription start site region 40062	209 bp upstream
Tssr40063	transcription start site region 40063	1697 bp upstream
Tssr40064	transcription start site region 40064	1757 bp upstream
Tssr40065	transcription start site region 40065	1772 bp upstream
Tssr40066	transcription start site region 40066	1901 bp upstream
Tssr40067	transcription start site region 40067	1949 bp upstream
Tssr44314	transcription start site region 44314	324 bp downstream
Tssr44315	transcription start site region 44315	1735 bp downstream
Tssr44316	transcription start site region 44316	1818 bp downstream
Tssr44317	transcription start site region 44317	1876 bp downstream