rs47744683 SNP Detail

Summary

• ID
  rs47744683
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:57585424 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTCCAATT GGCATTCCAA
  TTTTAACTGT AAAATCAAAG TGCTTTGTAG TAGTCACATC AAAAACATAC AGATGTACTC
  TGGTATATTT GCCAAGCATT CTTTTAATGA TCATAAAATA TTTTATAAGC GTAATGCCTC
  GGCCATCAGC ATCTATTCGT CAATTAAAAG TTGATATTAA CTTTGTTTAC AAAACAAGGC
  K
  AGCAACTTGG GAGCATCACC ATGACACCTG TAGAAGGGGT AGAGCATTAG GGTGTCACAG
  CGACCCAGGA AGAGCATGAA CTGATGCTTG TAAAGTTTAG AGGGAGGGAC TTCAGCACAG
  CAGTTCCTGG GGCTGCTGGG ATAGAGTACC GAATGTGTAC ATTTGCTTCA GCAAATGTCA
  CGGAAATTTT TCCCGAATAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss60617299	NES16285971	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs47744683					SNP	G	G	G	G	G	G	T	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60617299	NES16285971	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:57585424 () rs orientation: forward

Symbol	Name	Function Class
Rr814	regulatory region 814	914 bp proximal