rs47745722 SNP Detail

Summary

• ID
  rs47745722
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:10992575 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTCATTTA GAAGAAATTA
  CTAAGCATGT CTGTGAGGGC AGTTCAACAG AAATTATCGA AGGAAGAAAG ATCAACCCAG
  AATATGGGCA TCATCATACC ATGTGACACA CACAAAAGAG AGACAGACCA ACAAGGTTTC
  AGCATTCATG GCTCTGTTCC GGGCTGATGA CTCAATATAA CCAACTGCTT GCCAATCAGG
  M
  GATTACCACC AGAGCCTTTC TTACTGCCAA CAATGTATTC TCCACACTGA TGAACTGTTG
  CATCAAAATG TGGGCCAAAA CCTTCCTACC TTGAGTTGCT TTGCTGGGTA TTTGGTTAGG
  TCAACGGAGA TAGTAATTAA TATAAACACA AAGATTGTAC GATAGTCTAT GTCCTTCTGT
  ATTTCTTTGT GTCACCAGTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324260896	CHEV_13_10941785	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs47745722					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:10992575 () rs orientation: forward

Symbol	Name	Function Class
Rr270346	regulatory region 270346	within coordinates
Rr278201	regulatory region 278201	108 bp distal