TAACA GCTATCCTCA TTCAAACCTG R CAGTCAGCAC TCACCATTCA CAAGA R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|
ss148742747 | ENSMUSSNP4593092 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | G | ||
ss324277963 | CHEV_13_19397219 | CHEVERUD | SCREENING_POP | f | SNP | G | G | ||
SNP Consensus Information | |||||||||
SNP | Consensus Type | A/J |
DBA/2J |
LG/J |
SM/J |
||||
rs47748133 | SNP | A | G | G | G |
Location: Chr13:19489520 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Tcrg | T cell receptor gamma chain | within coordinates | ||||||
Trgc2 | T cell receptor gamma, constant 2 | within coordinates | ||||||
Tssr118532 | transcription start site region 118532 | 177 bp downstream | ||||||
Tssr121559 | transcription start site region 121559 | 961 bp upstream | ||||||
Tssr121560 | transcription start site region 121560 | 899 bp upstream | ||||||
Tssr121561 | transcription start site region 121561 | 357 bp upstream | ||||||
Tssr121562 | transcription start site region 121562 | 811 bp downstream | ||||||
Tssr121563 | transcription start site region 121563 | 952 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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