rs47750351 SNP Detail

Summary

• ID
  rs47750351
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:128653624 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGAGAAATGT TTTGCAGTTC TTATCAAGTT TAGTGTATCT
  GGTTTTATAC TGAAGTCTTT GGTCCATGTC GAACTAAGTT TGGTACAGAG TGATAAGTAT
  T
  ATATATTTGC ATTTTTCTAA TAAAGACAGT TTGAAGATCA GTTTCACCAG TTTCATTTGT
  TGAAGATGCT GGCTTTTTAT CTGGTGTGTA TTTATAGAT                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss133644094	ENSMUSSNP839025	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
ss321946005	CHEV_6_128626679	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47750351					SNP	T	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:128653624 () rs orientation: forward

Symbol	Name	Function Class
Clec2h	C-type lectin domain family 2, member h	within coordinates
Tssr59074	transcription start site region 59074	1900 bp downstream
Tssr59075	transcription start site region 59075	37 bp downstream