rs47750589 SNP Detail

Summary

• ID
  rs47750589
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:36395399 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGGACCTT AAGCCCTGGT
  TCAATCCTTA GCACCACCAA GAACAGAAAG AAAGAGAGCC TGAAGGCTGG AGAGGTGGCT
  CAGTGGTTAA GAGTGGGAAC TGTTCGTGCA GAGGATCTGT GTTCAGTTCA TATCGTCCAT
  GTCAGACAAC TTACCATGCC CTGTAACTCC ACCTCCACGG CGATCCAATG CTTCTAGCTT
  M
  TTTCAGCATT CGTACTTACA TTCATATACC CATACACAGA TCCACCTATC CAAATAATAA
  ACGCAAATCA ATTTTAAAAA TCTTAGAAGG ATACAAACAC TAGATAACAG AAACTAAAGC
  TATTTTCTTT GCATATGACA AAATTATACA CATCAAAAAT TTAATAGAAT ATCCAGACTT
  ATTTGGAGTA GAAAGAGAAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss148872105	ENSMUSSNP4511203	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs47750589					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:36395399 () rs orientation: forward

Symbol	Name	Function Class
Fars2	phenylalanine-tRNA synthetase 2, mitochondrial	within coordinates
Gm40912	predicted gene, 40912	within coordinates
Rr279014	regulatory region 279014	1860 bp distal
Rr286029	regulatory region 286029	within coordinates