rs47756376 SNP Detail

Summary

• ID
  rs47756376
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:101865698 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GACAGTGAAC AGGGATTCAA GTCAGCAGCA GAGGCAGGCA
  CAGCCAACCC CTGGGAGACA GGTTTCAGAA GATGTTCTCT GGTTGTGAAT GTTGGGAAAT
  R
  TTTTTAGAGG TGATGATGGC AATATTAGAT TAATAGATCC CCATAATATG TGGCATTTTA
  TAGTGACGGT GTGGCCTTCA CACAATTGTT ATTAATAGGA                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss61446068	NES16829102	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs47756376					SNP	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61446068	NES16829102	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:101865698 () rs orientation: forward

Symbol	Name	Function Class
Ephb1	Eph receptor B1	Intron
Gm31326	predicted gene, 31326	761 bp upstream
Gm69124	predicted gene, 69124	662 bp upstream
Rr685661	regulatory region 685661	1250 bp distal
Rr685662	regulatory region 685662	1717 bp proximal
Tssr86718	transcription start site region 86718	694 bp upstream