rs47756602 SNP Detail

Summary

• ID
  rs47756602
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:71368563 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCAGAATAAG CCCTTCCTTC TCTAAGTTGC TTTGGTCATA
  GTGATGGTGT TTTAGCACAG TAATAGAAAT GTAACCAAGA CAATGAGTTT CCAAATTTCT
  Y
  TCTTTGTTTC CTTTCTTTTT CTTTTTTTCC TTTTTTTTCC AGACAGGGTT TCTCTGTGTA
  GCTCTAGCTG TCTTGGAACT CACTCTGTAG ACCAGGCTG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss137871002	ENSMUSSNP1558151	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss324091299	CHEV_12_72422776	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs47756602					SNP	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:71368563 () rs orientation: forward

Symbol	Name	Function Class
4930474H06Rik	RIKEN cDNA 4930474H06 gene	103 bp upstream
Dact1	dishevelled-binding antagonist of beta-catenin 1	1682 bp downstream
Rr267972	regulatory region 267972	638 bp proximal