rs47757657 SNP Detail

Summary

• ID
  rs47757657
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141151821 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTTA CCTTCCTTGT AACTCTCGAA
  R
  CCTCAAACCC AGGGCTACCT GTCAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147736174	ENSMUSSNP4714132	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47757657					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141151821 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15228	CpG island 15228	1326 bp proximal
Gm70191	predicted gene, 70191	within coordinates
Hspb7	heat shock protein family, member 7 (cardiovascular)	within coordinates
Rr603759	regulatory region 603759	315 bp proximal
Rr603760	regulatory region 603760	793 bp proximal
Rr603761	regulatory region 603761	1784 bp proximal
Tssr40062	transcription start site region 40062	1987 bp downstream
Tssr40063	transcription start site region 40063	501 bp downstream
Tssr40064	transcription start site region 40064	440 bp downstream
Tssr40065	transcription start site region 40065	413 bp downstream
Tssr40066	transcription start site region 40066	309 bp downstream
Tssr40067	transcription start site region 40067	255 bp downstream
Tssr40068	transcription start site region 40068	200 bp downstream
Tssr40069	transcription start site region 40069	73 bp downstream
Tssr40070	transcription start site region 40070	7 bp upstream
Tssr40071	transcription start site region 40071	31 bp upstream
Tssr40072	transcription start site region 40072	76 bp upstream
Tssr40073	transcription start site region 40073	99 bp upstream
Tssr40074	transcription start site region 40074	124 bp upstream
Tssr40075	transcription start site region 40075	137 bp upstream
Tssr40076	transcription start site region 40076	164 bp upstream
Tssr40077	transcription start site region 40077	183 bp upstream
Tssr40078	transcription start site region 40078	1899 bp upstream
Tssr44314	transcription start site region 44314	1871 bp upstream
Tssr44315	transcription start site region 44315	436 bp upstream
Tssr44316	transcription start site region 44316	338 bp upstream
Tssr44317	transcription start site region 44317	310 bp upstream
Tssr44318	transcription start site region 44318	48 bp downstream
Tssr44319	transcription start site region 44319	1058 bp downstream