rs47760068 SNP Detail

Summary

• ID
  rs47760068
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:79192782 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGTTGTCTC CTTCTTGGCT
  GTAGTTTCTT TTTTTTTCTT TTTTTCTAGT TGACTAGGTC TCCTGTGCAT CGTTTTATAA
  TTATTTCTTA ACAGTGCACT GATCAAAAGG TTCATAATTT TTTTTAGCTA AGGTATATCT
  TTTGAGAAAG AATAGTTTTG CTTCTAATAC CCATTTTTAT TGATGATTAA GGTTGGTCTG
  Y
  TGGCCTTATG CTTTGATGTT TCAAGTTAAG ACTTCTCATC TTTGTATTCT TTCCAAGTTC
  TGCTTTAGAA TGAGTTGGGC TCAAGAGGAA AGTTCCTAAC TGTACAGCTT AAATTCGTGA
  TGAAACCGCA TTGGTCATAG CCTAAATCTT TAACCGACCT CTGCAAATGT TAAAATAAAA
  TGTATGGTTT CCCAGCACTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss61653317	NES17602452	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs47760068					SNP	T	T	T	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61653317	NES17602452	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:79192782 () rs orientation: forward

Symbol	Name	Function Class
Arg2	arginase type II	Intron
Gm40462	predicted gene, 40462	within coordinates
Tssr114084	transcription start site region 114084	151 bp downstream