rs47760393 SNP Detail

Summary

• ID
  rs47760393
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:33152223 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAATCTCTT CAAAAATCCT
  AAGATCTCCC TAGTCCCTTC GAATCACTGT TCTGTGGTCT GAGCCATCTC CTTCATCTTT
  CCCCTCCACC CTGTCCCCAA CACACATTTT CTTGTGACTC CTCTTCATCT TGTCCTTCTT
  CAGACAGGTC TTCCCTGACT TTCCACTCCT GAACACTCTC ACCTACATCC TTCTTCCCTC
  C
  ACTCCTGGTT CTTCCCACAC AGTTTTCTTT GTGGAGCACT TTTTTTTTTT CAGTGCCCCG
  ACTGAACACC ATGAAGACTG GGTTCACGTA GGTCTTGTTT ATGTGTGTAG CCCCGTGTAA
  ATGTCAGCAA TGTTAACGTA TTAAGTGAAT GAAACCCTCA GTGGAGGGAT GCTGGCCACG
  AGCTGTGCAG CTACCCAGCT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss137582097	ENSMUSSNP1883295	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs47760393					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:33152223 () rs orientation: forward

Symbol	Name	Function Class
Gm59430	predicted gene, 59430	489 bp upstream
Rr464869	regulatory region 464869	within coordinates
Rr464870	regulatory region 464870	500 bp proximal