rs47767877 SNP Detail

Summary

• ID
  rs47767877
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:3667861 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CAGCA AGGAGTGGGG GCAGCATCTG
  K
  CTGAGAGTGG AGCCTACAGT CCAGG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146748690	ENSMUSSNP693093	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	T
ss323242498	CHEV_10_6628680	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47767877					SNP	G	G	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:3667861 () rs orientation: reverse

Symbol	Name	Function Class
A330032P22Rik	RIKEN cDNA A330032P22 gene	297 bp upstream
Gm56946	predicted gene, 56946	within coordinates
Rr426848	regulatory region 426848	within coordinates
Rr426849	regulatory region 426849	313 bp proximal
Tssr92213	transcription start site region 92213	291 bp upstream