rs47768546 SNP Detail

Summary

• ID
  rs47768546
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:154067179 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCCCCACCTT TGGGTTCTTA CAGTCTTTCT ATCCTCTTTT
  ACATGATATT CTTTGAGCCA TGGAATAGTG GTGTGTAGTC TTGTTTAAGG TAAAGTAATC
  S
  ATAGTCGCTT GCTTTCTGTT CCATGACTCT ACATTAGCCA CTGTTTGCTG CAAGGGCCCC
  AGCTGGGAAA ACTACTGCTG AATTTTCTCT CTGTTACCT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145757393	ENSMUSSNP1073683	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47768546					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:154067179 () rs orientation: forward

Symbol	Name	Function Class
Rr420824	regulatory region 420824	716 bp distal