rs47773282 SNP Detail

Summary

• ID
  rs47773282
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:76345592 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGGACCTG ACTCAGCTCC
  AGACTTCTCC TCCCTGAGTC AGGGCTGTCA CTGACTAAAG TCCCATTGTC AGTGGCTCCT
  TCTGAGGAAC CCAGTATGCT TCCTGGGGAA TTGAAAATTT TATTCCCAAT GCTTTCAGAA
  CTCAAAAGAA GTGTTAGAGA TAAACGTGAG TCCAATCTGT GGCTCCCCTA GAATCTCACC
  M
  ATCATCTATT GTCTCCAAAG CCTGCTTCCG TCTTCTCTCC AGCACTTCCT TGTGCATTCT
  GACCCACATA AACTTTGACT CAAGGAGGAT GACTTCACAG TGGACTGATC CATCTGCCCT
  CCGGTTTCCC AGAAGATTAG GATCAGGCTG CAGCTGAAAT TGTGCTTCAG GTAACTTGAA
  GTCATCATTT TGCTGACAGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148381296	ENSMUSSNP7935	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47773282					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:76345592 () rs orientation: forward

Symbol	Name	Function Class
Gm30726	predicted gene, 30726	91 bp upstream
Rr370111	regulatory region 370111	912 bp upstream
Rr518205	regulatory region 518205	955 bp proximal
Tssr139022	transcription start site region 139022	39 bp upstream