rs47778074 SNP Detail

Summary

• ID
  rs47778074
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:35223246 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAGACCTCT CCTCTAACTG
  CTCTCTCTCC CTCTCTCCTT TTCCTGTTTC CACAAATGGT CCCAGCAATG TTTGTTCCAT
  TTTTAGGCTA CTCTAGATTC TCCTTTGACA TTGTTCTTCT CCCTCCACTA ACAGCTTGTC
  TCCTGGTGGA GTGGATCATT TACATTTTTT CTCTCTTCTT TTGCAGTCCC AGTTATCATG
  Y
  GTCTGTTCCC AAGTGGGATG TGTAGTGAAG GATATCTCTA ACAAATACAA GAAAAATCAC
  TACCATCCTC AACAGCATCC ATCATCGTTG TCACTATCCC CCTACTCAGC ATCAGGAGCA
  GTGGCATCAC CATCATCACC CTCATCAGCC ACAGCACCAG TCTGAACAGG ACTGGATACC
  ACATAGAGCT CAGCACTCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61379240	NES16758955	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs47778074					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61379240	NES16758955	PERLEGEN	MM_PANEL	f	SNP	C/T