rs47785804 SNP Detail

Summary

• ID
  rs47785804
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:78430529 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTCTTGGCG ATGGCCTTCA
  AGGTGTACCA TGAGAGAGAT GAGAAAGCCC AAAAACAAAA ACACTGCAAG CTGGCAAAGG
  CTGTCCGACC AGCTCTAGCT ACTACCCCGA ACTCCTGGCC TTCTAAGGTT CAGGGACCAC
  TAGCCCCTTG CTATAGATGT GGTCAGCAAG GTCATTGGGT GAGGTTTTGC CCTACGCCCC
  R
  CAAGCCAAGG GGACCGTGTC CTAAGTGCCG TCAGGAGGGA CATTGGGCTG TCGATAGCCC
  TCGTGTTGCA CAGAACAGAG GGACATCCGG TCCAGGTACT CCTCCAGCTG ACCGCCTAGG
  CTTGGCTATG GGTGACCTAA GGGGCCGGAG CTCCTTCGAC CCAGCCACGC CCATCACTAG
  CAGGGAGCCC AGGTAGCTAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss136668119	ENSMUSSNP1822062	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
ss323016432	CHEV_9_78371054	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47785804					SNP	G	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:78430529 () rs orientation: forward

Symbol	Name	Function Class
Gm47430	predicted gene, 47430	1090 bp downstream
Gm69163	predicted gene, 69163	1772 bp upstream
Rr206776	regulatory region 206776	1128 bp distal
Rr383643	regulatory region 383643	1196 bp upstream