rs47791195 SNP Detail

Summary

• ID
  rs47791195
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:89721570 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAACTACTG CCTCATTCTT
  AAATTTCCCA TCTGATCATC ACTTCATTTG AATTATGGAG AGATTCTGTA CAGAACACTT
  GACCTTCTAT AAACTGAAAT TTTAATGGCT TTTATTCATA ACATGAACAT CGAAATATTA
  TCAGCATGAA AATTACCTAA ACATAGTGTT GTATAGCAAG TACCCGACTC CAACTACCTA
  R
  TTGTTAAAAC AGAATATCTT TTACTTACTC TTTGACACTT TCAGTTTGTA AATGGTGCAT
  CTTTATCATA TGTGTCCCAG TTTCCCGCTC CCACTGCCCG CATTAAACCC ATAAGGTGCC
  CCCTCCTCAC TTTTTGTTCT CACTGACCCT TCTTTTTCGT TAGTAACTCT CTGTCCAACT
  GGTGTGGCCT GTTGGGATGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61031856	NES16094493	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs47791195					SNP	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61031856	NES16094493	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:89721570 () rs orientation: forward

Symbol	Name	Function Class
Rr650898	regulatory region 650898	1608 bp proximal
Tssr2327	transcription start site region 2327	670 bp downstream