rs47793748 SNP Detail

Summary

• ID
  rs47793748
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:106344216 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTCT TATCACCAAT ACCGCTGCCC
  T
  ACCAACCCTG CTGCCCACTC AGAGC                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss136936776	ENSMUSSNP5274086	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss323185290	CHEV_9_106369348	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs47793748					SNP	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:106344216 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22268	CpG island 22268	925 bp distal
Gpr62	G protein-coupled receptor 62	1079 bp upstream
Rr686360	regulatory region 686360	1884 bp distal
Rr686361	regulatory region 686361	589 bp distal
Tssr91320	transcription start site region 91320	1715 bp upstream
Tssr91321	transcription start site region 91321	1027 bp upstream