rs47796631 SNP Detail

Summary

• ID
  rs47796631
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:76724146 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACGCCAACT CCTATCTCCC
  CTCCTTTCTC TCTAGAAAGA GCTCCCTAAT GAGACCGGGC TATGGAGGGA GCTGGCCAGA
  TGTTCTGAGA GTATGACGTC ATTGTTCCGC CCCTGCTGGC GTACCATTTT CAATACCGTC
  CATCACATCA CTTGTCATTT GTTGGCTTAA ATAAGTAGCT GGGTGGTGTG TGTGTTTGGG
  R
  TGGGGGGGAC ACTCTTCTGA TTTTCATTTT CATCAATATT GCACATGACA ACTACAGACC
  TGGAAAACCA CAAGCTACCC CAGCCAGTGA ACTAGCCCAC TGTGGCTCCT TCACGCTTCG
  ACACATGGGG TCCAATGAAT TTACTGTGCT CCAACCTAAG ATCCATCAAA GCTGTTTTTA
  CGACAGGCAG TGGTGGCACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss137907699	ENSMUSSNP6783834	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs47796631					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:76724146 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4784	CpG island 4784	699 bp distal
Gm60317	predicted gene, 60317	742 bp downstream
Rr468228	regulatory region 468228	1519 bp distal
Rr468229	regulatory region 468229	674 bp distal
Rr468230	regulatory region 468230	20 bp distal
Sptb	spectrin beta, erythrocytic	within coordinates
Tssr113983	transcription start site region 113983	1071 bp downstream