CACCCAGAGA ATCCTAGCAA ACACTAGTTG TGGCCCAGTT CATACATGTA CCTACAGGTC CTCAGACCAA ACACAGACAT GTCCACATTC CAAATGTATC CCAAAGAATG AGGCTAAAAA CATAGACCTG TCTACATTCA TACAGCCCAT ACGGCATCAT GCACATGCTT GGACATATTA GTCACCCCTC CACCTTAATT Y TGATGGGTCA CAGATACCCT GTGCCATGGT GCCCACTGTG AGGTCTCTGG CGGAGCAGGT GCTTGGGTGC TGCATATGGA ATTCTCTGCG GAGGTCGTAG AAGGAGAAGA AGGTGTCGGG GAGCACCAGG TTCTGGGAGC ACATGGGAGT GGGGGTGAAT AGGTAACCTA AGGTGTTTAC AACAGGGGCC TTGGGAACCC Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
MSM/Ms |
---|---|---|---|---|---|---|---|---|
ss145731889 | ENSMUSSNP1484928 | ENSEMBL | ENSEMBL_Sanger | f | SNP | T | T | C |
SNP Consensus Information | ||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
MSM/Ms |
||||
rs47800885 | SNP | T | T | C |
Location: Chr8:106861224 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
1810019D21Rik | RIKEN cDNA 1810019D21 gene | 808 bp upstream | ||||||
Cpgi20965 | CpG island 20965 | 1150 bp proximal | ||||||
Esrp2 | epithelial splicing regulatory protein 2 | Intron | ||||||
Rr669096 | regulatory region 669096 | 390 bp proximal | ||||||
Tssr79219 | transcription start site region 79219 | 809 bp upstream | ||||||
Tssr79220 | transcription start site region 79220 | 843 bp upstream | ||||||
Tssr79221 | transcription start site region 79221 | 872 bp upstream | ||||||
Tssr79222 | transcription start site region 79222 | 905 bp upstream | ||||||
Tssr79223 | transcription start site region 79223 | 949 bp upstream | ||||||
Tssr79224 | transcription start site region 79224 | 1277 bp upstream | ||||||
Tssr79225 | transcription start site region 79225 | 1350 bp upstream | ||||||
Tssr82755 | transcription start site region 82755 | 341 bp downstream | ||||||
Tssr82756 | transcription start site region 82756 | 353 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 07/22/2025 MGI 6.24 |
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