rs47806056 SNP Detail

Summary

• ID
  rs47806056
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:72078215 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCCC CAGCCCCTCC TGCCTTCCAT
  R
  CTGTGATCCT CATCCTCTCG GCCCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss136619490	ENSMUSSNP1925939	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss323001957	CHEV_9_72018740	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs47806056					SNP	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:72078215 () rs orientation: forward

Symbol	Name	Function Class
Gm69817	predicted gene, 69817	993 bp downstream
Rr197169	regulatory region 197169	1815 bp distal
Rr197170	regulatory region 197170	within coordinates
Rr197171	regulatory region 197171	386 bp proximal
Rr383574	regulatory region 383574	478 bp downstream