rs47806929 SNP Detail

Summary

• ID
  rs47806929
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:136096815 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTGGATGC TGCCATGCTC
  CTGCCTTGAT CATAATGGAC TGAATCTCTG AACCTGTAAG CCAGTCCCAA TTAAATGTTG
  CCCTTATAAG AGTTGCCTTG GTCATGGTGT CTGTTCGCAG CAGAAAAACC CTAAAAGACA
  TTCTCAAAGC CCCTGAACAC ACCAAACTTG CTCCCGTCTT CAAGCATTCC CCAGGGCTTC
  G
  GATCCCCTTG TGGCATGTAC TTTTTAATCC ATCAGATATC TACACAAATG CCACCTCCTC
  CTAGAGAGCA TCCTAGATAA CATCACCTGA AAAGACTCCT CCCTCTTTTA TTTCACTTGA
  GCAACTTTCT AACAGCAAAT TGTGTTAATT TCTGTCAGAT CTGCAGCAGC ATGTCTCTTG
  TCTGTTTTCC ACCCCACTAA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss133829309	ENSMUSSNP2293324	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47806929					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:136096815 () rs orientation: forward

Symbol	Name	Function Class
Grin2b	glutamate receptor, ionotropic, NMDA2B (epsilon 2)	within coordinates
Tssr2039	transcription start site region 2039	470 bp upstream