rs47819987 SNP Detail

Summary

• ID
  rs47819987
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:16195557 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AGGCAGTTTT GTGGGTACTT GAAGCCCCAG CCTGTAGCAC
  CTTAATCTTG AAGAATATCA GTTACTTCCT CCCTACATCC CCACCTTCCT GCAGAGTTCA
  G
  GTTTTATAGG CTGGGGGATG CACAGCTACC TTTAAGAATA CATTGAGTCA CAGCACTGAA
  AGTGCTGGGG TCCACATGAA AATTCCACAG CTCCATGGGC A                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148702960	ENSMUSSNP2082617	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs47819987					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:16195557 () rs orientation: forward

Symbol	Name	Function Class
Inhba	inhibin beta-A	within coordinates
Tssr118445	transcription start site region 118445	1037 bp downstream
Tssr118446	transcription start site region 118446	701 bp upstream