rs47824091 SNP Detail

Summary

• ID
  rs47824091
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:56527900 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTATCCTGCC CACCCATCTA CCCTACGCCC TGCCACTGCT
  CATGGCTGTG AGAGAGAAAT AGAGAGTTGC TCAGCTGAGG TTGGTTCTCA GTAGTATCCA
  S
  CCCTGGTGGC AGCATACATA CATATCAGGT CAGTCTAAAC TACCAAAGGG CCTGAGCCAA
  CTGCGCAAGC TTGAACTCGG TGTCCTCCAC CGTGAAGAC                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss149044568	ENSMUSSNP4704745	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
ss324346599	CHEV_13_56481448	CHEVERUD	SCREENING_POP	f	SNP				G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47824091					SNP	G	G	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:56527900 () rs orientation: forward

Symbol	Name	Function Class
Rr272828	regulatory region 272828	within coordinates
Rr284344	regulatory region 284344	701 bp proximal