rs47829411 SNP Detail

Summary

• ID
  rs47829411
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:52655266 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCGGCCAGT TGAGAGCACC
  TGCCGTCCTC GCAGAGGACC TGAGTCCAAC TCTCAGTATG TGGCTACACA TAGTGTGAAT
  ATATACATTT TTTTTTAAAG TCGTCTTTAA ATGCCTTGAC TTGTGGCTTT CTTTTAACTC
  TGTTAGTATT AAAACTCCAT ATGACCATTT TTGAACACAA GAATTGAGGT GAACCTGAAT
  C
  TATGCTTTTT GGGTCATGGC TACTCATATT TGGCTCCAGA AATGTCTCTT ACTACCCTTG
  AGGTGAGAGC TGTGTTCTTG CTTTGACACT GGTGTGAGAT CTTCATTGTG CATAGAGTTT
  TCTCACAGTA AGCACTTCAC TTAATTTGTA GTGAATGTGC CATTGGACGT GCCAGATGGG
  GGAAGCTGTC ATAGATGAAC                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss137738432	ENSMUSSNP1141073	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J
rs47829411					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:52655266 () rs orientation: forward

Symbol	Name	Function Class
Gm35239	predicted gene, 35239	within coordinates
Tssr113445	transcription start site region 113445	840 bp downstream