rs47830385 SNP Detail

Summary

• ID
  rs47830385
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:122798640 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATCCCAGCA CCTGGGAGAC
  AGAGGCAGGT TGACCTCTTG AGTTTGAGGC CAGCTTGGTC TACAAGTGAG ACAGATTTTT
  TTTTCTCTGT CAGTGTAAAA GATAATTAAA TCACCAATTC CTGCACTATC TACACATGCC
  TTTGTAAATA TGTGTAATAA TATTGCTGTT TGATGTTGTT ATTATTATTT CTCTACTTTA
  M
  TAGCTAAATT TAATGTGGCA GAATTTTCGA CATATGAGAT GCTCTTTGTT CGCTGTGAAT
  ACCTACCACA GAATTTCTTC TATTTTCTCT TTCTTTTGAT AGAATGTTTG CTATGCTTCC
  TCACCGGGAA ATTACAGATG TGAATCCCCA CCCCACCTCC AGCAATTTCC CTCAAATCAA
  TGATGAATAT TATTATTCTA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss135754517	ENSMUSSNP4949263	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47830385					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:122798640 () rs orientation: forward

Symbol	Name	Function Class
Myoz2	myozenin 2	1215 bp downstream