rs47835708 SNP Detail

Summary

• ID
  rs47835708
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101127982 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACGGGAATGC ATTGCACTTC
  CCAAGTCTGG ACCCTGCAGC AGATATGCAG GAAGGCAGGG ATGAATGTCT GCAGCCAATA
  CTTGATTGCC AGGCGTGGTC CTAAGGGAGG CATAGCTGCA GTCAGTCCCT CACCCCAGTC
  CCTCTCCTCC CCACTATTTT GAAGTAGCAA TCTTTTAATG AATGACAGAA CAGTAATTTT
  W
  AAAAAGGGAA ATACAAAGCC TGGGATATTA GTGACACTAT CTCCCAAGCA GACTGACTTA
  GCATGGACCA TACTATACAC CATCAGGAGG ACGATTCAAG GTCAATGGCC TTTAGTACAC
  CCATGGGCAC TGATGTCTCT GCTATGTCCA CCTTTACATC TGATAAGATT TTTGCTTGTG
  CACTGTGTGT GTGTTTTAGT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320851488	CHEV_3_101024589	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs47835708					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101127982 () rs orientation: forward

Symbol	Name	Function Class
Gm65590	predicted gene, 65590	within coordinates
Rr581978	regulatory region 581978	568 bp distal