rs47836346 SNP Detail

Summary

• ID
  rs47836346
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:18339799 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCAGTAAAAC ACTAAGACAA CTGTCAACCT CAGTTCTCCC
  TTTTGGTTCA GCAAAAGCTT GAAACTTAAT GTTCATTAGC AACAAATGGA ACACTTTACC
  M
  TTGGGCTGCA CTGTGCAACA ATAGTGAGCA GAGCAGTGTG AGGAGGGTAC CAGCAGCTTG
  AAAAAAATGG ACACAGACAT TGTGGTACCA TATGCTCCAT                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss60972483	NES16148812	PERLEGEN	MM_PANEL2	f	SNP	C	C	A
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs47836346					SNP	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60972483	NES16148812	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:18339799 () rs orientation: forward

Symbol	Name	Function Class
Psg23	pregnancy-specific beta-1-glycoprotein 23	469 bp downstream
Tssr2096	transcription start site region 2096	1164 bp downstream