rs47837011 SNP Detail

Summary

• ID
  rs47837011
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:44054015 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTTA GAAAAATAAA GTGTTATTGT
  Y
  CCAAAAGCAT GATGCTGTGT TCCAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss136391601	ENSMUSSNP6626860	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss322940207	CHEV_9_43950801	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47837011					SNP	C	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:44054015 () rs orientation: forward

Symbol	Name	Function Class
Cbl	Casitas B-lineage lymphoma	258 bp downstream
Mcam	melanoma cell adhesion molecule	within coordinates
Rr383290	regulatory region 383290	1365 bp downstream
Rr677565	regulatory region 677565	1403 bp proximal
Rr677566	regulatory region 677566	1730 bp proximal
Rr677567	regulatory region 677567	1823 bp proximal
Tssr89112	transcription start site region 89112	1809 bp downstream
Tssr89113	transcription start site region 89113	1995 bp downstream