rs47837475 SNP Detail

Summary

• ID
  rs47837475
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:38780776 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAAGAGATC TGGCATTTTC
  CAATGCAATG AGTTCAACAA TGATAACATT TACCAGTGGC CTTATGGAAC ACAGAGCGAA
  GGATGTACTA TAAAGACAAG GGGATGGTTT AACTGTTGCA TGTGTCAGGC TTGAAGCCCT
  TCAGATCTTC CAGCTGGAGT AGTTTAACAA CAAATTGGAA GCTTTGCCTG ATACTTAGAT
  M
  AGAAGATCAA GCTGAAGGCA CAAATCGTGC AGAAAATGTT GGCACTCCCA CTGAGAGGTT
  GTACAAAATC ACTCCGAGTG ATTTGCAAGC TGGGGAAGGA ACAACAAACA GTTGGAAATT
  TAGATAACAT TTAAGATTGG ACTGGGGGAA AAGAAGCTAA TAAAGGAGAA GGTGGAGAGC
  AAAGAGGAGA ACCAGATGTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss52235625	NES15208569	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	A	C	C	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs47837475					SNP	C	C	C	C	C	A	C	C	C	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52235625	NES15208569	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:38780776 () rs orientation: forward

Symbol	Name	Function Class
Gm66419	predicted gene, 66419	1816 bp downstream