rs47837776 SNP Detail

Summary

• ID
  rs47837776
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:119799873 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C CCCAAAACGG GGTACGGCAG CCTGCTCTGC ACCCCTGACC
  TTAAACCCTA TTCTGGCTGC CTCAGGACAG GTCTGGCAGG TCTGGCAGGT AGAGACAGTT
  Y
  TGGAGCTCAA GTCCCCAGGG ACTACAGCTG CCTGAGCAGC CTGTCACCAG GCCAGGCCTC
  CACTAGGCTA GGCTGCCCTC CCTGGGCCTG AGCAGACAGC T                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss137050744	ENSMUSSNP5358845	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47837776					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119799873 () rs orientation: forward

Symbol	Name	Function Class
Csrnp1	cysteine-serine-rich nuclear protein 1	356 bp downstream
Rr688588	regulatory region 688588	within coordinates
Rr688589	regulatory region 688589	111 bp proximal