rs47838336 SNP Detail

Summary

• ID
  rs47838336
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:74591461 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCCA TACCAGGTTG TGGTGCCTCA
  Y
  TGGCACCTTT ATTTTCTTGT CATAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss139742212	ENSMUSSNP1156740	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
ss324670977	CHEV_14_74753828	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47838336					SNP	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:74591461 () rs orientation: forward

Symbol	Name	Function Class
4933402J15Rik	RIKEN cDNA 4933402J15 gene	1506 bp upstream
Gm49171	predicted gene, 49171	within coordinates
Rr495306	regulatory region 495306	1527 bp distal