rs47847441 SNP Detail

Summary

• ID
  rs47847441
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:77921841 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAACGATT TTTGAAAATT
  GAGGTGGTGG ACTCGCCGGC TATCCTGTCT GACCTCTGCT CTCTGCTTTT GTCTGCTGAA
  ATCTCACACT GTGAGATGTG TGTCCACTTA TTACATGGGA ATTACATGAG GATCAAAGCA
  GACATTCACC TGCTCTTTAC CAGGACAGAT CCAGATTGCA GCTAACAATA TCTTCACCTC
  R
  CTTGTCACTC CCAAGTGAGT TACACAAACA CTGTCAAGAC AGACAGTCCT TTCCAAATGA
  CAGCAGAAAT CAGGATGTCT GCTCTCCAGT TCAAGAGTTC AGTGGACCCA TTACTTTAAA
  GGGAGCTTGC TTAAATTTCC TGAGAGGATC TTTCTAAAAT AGCTCTTTCT CTCTCCCAGC
  TGACTTGCAG ACCTAACTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss136663647	ENSMUSSNP720180	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs47847441					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:77921841 () rs orientation: forward

Symbol	Name	Function Class
Gm23609	predicted gene, 23609	461 bp upstream
Gm39375	predicted gene, 39375	459 bp upstream
Gm69108	predicted gene, 69108	636 bp upstream
Rr683457	regulatory region 683457	502 bp distal