rs47848547 SNP Detail

Summary

• ID
  rs47848547
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:81471310 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTTGTGTCC TTTCTCAGGA
  GCAGACTTTT GTTCAGTCGG ATAGACATGG CTAGCCATAA AAACACCACA GGCTTCCTGA
  AAGTGAGGAA AACCTTCCTG TCTGACCTTA AGAGCCCAAG CTGTCCACAA CTGTGAACAA
  CTTCCATCAG ACTGTGCATC TGTCATGTGA CTTGACGGAC TCAACTCTGA TTGGAACTGT
  R
  TCAGCACAAG AGACTTAGCC AATATCCTCA AGGGTTCAAG TACAGAGTTA GAGCTCGGGG
  CTGGGGTTGG GAGATACCTC AGTCAGATTC CAGTGTCTGC ACTTCCTGAT TGAGTAACAT
  CTCTTCTCTA ATCTCAGTTT CCACATCTGA AAAGGGAATT GTAAAATATC CCTCCCTAAG
  AGCTGAGGTG AAGATGAAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss61856812	NES17787960	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs47848547					SNP	G	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61856812	NES17787960	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:81471310 () rs orientation: forward

Symbol	Name	Function Class
Adgrv1	adhesion G protein-coupled receptor V1	within coordinates
Rr277293	regulatory region 277293	110 bp distal
Rr285047	regulatory region 285047	291 bp proximal