rs47849294 SNP Detail

Summary

• ID
  rs47849294
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:15084537 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGTTCTGTCT TCACAGTACT TGGAGGCCCC ACTTGTAAGC
  CCAAATATTG GAAACTGGAA AGAGAATTGT CTGAGATCAA GGTTAACCTG GCCCACATTG
  G
  GTATTTGAGA TCCTGTTTAA GAAAACAACT CTGAAACACA TGCTAAGTCC AAGGCCTCGC
  TTACCAATCC TTGTCTATTA TAAAGAACTT ACCATTCTC                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147916758	ENSMUSSNP1857411	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs47849294					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:15084537 () rs orientation: forward

Symbol	Name	Function Class
Gm17019	predicted gene 17019	1525 bp upstream
Gm71745	predicted gene, 71745	within coordinates
Rr121531	regulatory region 121531	1764 bp distal
Rr121533	regulatory region 121533	840 bp distal
Rr121534	regulatory region 121534	646 bp proximal
Rr121536	regulatory region 121536	1776 bp proximal