rs47856687 SNP Detail

Summary

• ID
  rs47856687
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:144103603 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTTA CAGCCTCATT CATAGCATTA
  G
  TAAACGGCCC AGGGACCAGA GGATA                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss136030744	ENSMUSSNP5405001	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs47856687					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:144103603 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13898	CpG island 13898	1051 bp distal
Gm65349	predicted gene, 65349	1103 bp upstream
Rr586643	regulatory region 586643	1124 bp distal
Rr586644	regulatory region 586644	954 bp distal
Rr586645	regulatory region 586645	1468 bp proximal