rs47861337 SNP Detail

Summary

• ID
  rs47861337
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:75554938 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGTCACGT GAGATATTTC
  CCTTTCTCCT TTGTCAGACC TTCTATGTGG TAACCATTGA CCTAATCCCC AGAACCAGTC
  TCTGAGATTA TTTAGACAAA TGTGCCATCC CTTCCCTTCC TGAAGTGGAT CATTACACTT
  TTTTAATTAA AGAAAAAAGA TTAGCAAATC CATGGCTCAT GCTTCAGTAT TATCCGAAGA
  Y
  CGTCAGTAAT TTTGAAAAAC TGCAACCAAT TGGGGAGTCT TGTTTTCTTG TGATCTTGTT
  TCCTCCTACA ACCAACATCT GTCTCTGTCA TTTGAAGGTG GTTCTTTTAG ACTTTTTGAA
  AAAGAGGATT TATTTATTTA TCTTATGTAT ATGAGTACAC TGTAGCTGTC TTCAGAGTCA
  CCAGAAGAAG ACATCAGATC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss144696750	ENSMUSSNP109367	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47861337					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:75554938 () rs orientation: forward

Symbol	Name	Function Class
Gm69448	predicted gene, 69448	1711 bp upstream