rs47865113 SNP Detail

Summary

• ID
  rs47865113
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:46039347 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAGCC CTGACATAGT TGTTAGGGGA
  S
  CCACATGACG ACAAAGCTGC ACGTC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136423331	ENSMUSSNP5697977	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47865113					SNP	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:46039347 () rs orientation: forward

Symbol	Name	Function Class
Rr678056	regulatory region 678056	1323 bp distal
Rr678057	regulatory region 678057	365 bp distal
Sik3	SIK family kinase 3	within coordinates
Tssr84829	transcription start site region 84829	812 bp downstream