rs47867749 SNP Detail

Summary

• ID
  rs47867749
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:121743133 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCAGTAGAG GTGACAGAAA
  GTGACATCTC AGAGGCGTTA CCGGGTTTGA AGGGACAGAA CTGGGTCGGT TGTCTGTGAG
  GGAGGAAGTG AGGTGCTTGG AGTATGCTCA GGGTCATGGG TGAAGAGCAG TCTGGAGCAG
  AGAGGCAGGA GAGTAGGAAA GGGAGCCATT CGACAGAGCG TGGGACAGAT GCTGAGTTTT
  R
  CATGGACAAA GCATATCTGA GGAGCTGCGA GATCCCACAG GGAGATGGAA GGCATGCGGG
  CAGAGAGAAC CAATACAGTG GTGCCCTTGC AAACCACGGG GAAAAGATGC AGAGCAGACA
  CAGACATAGA GGGGGCACCT CTGAGTGGTT CCTGTATCAA ATGTGGCCAT TCTCCAGGCT
  TGGCTCCCAA GCCCGTAGCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss61238806	NES16858684	PERLEGEN	MM_PANEL2	f	SNP	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs47867749					SNP	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61238806	NES16858684	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:121743133 () rs orientation: forward

Symbol	Name	Function Class
Cyp8b1	cytochrome P450, family 8, subfamily b, polypeptide 1	289 bp downstream
Tssr92081	transcription start site region 92081	613 bp downstream
Tssr92082	transcription start site region 92082	752 bp downstream
Tssr92083	transcription start site region 92083	1108 bp downstream