rs47870167 SNP Detail

Summary

• ID
  rs47870167
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:178047683 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGAATATAT TCAGAAAAAT GCTCACAATC ATGAAAAAGC
  ATCTGTTTAC ACATTTGGTA ATGAAACAAA ACAGTTTTCA GAAATGTGCT GCTGCTGTGT
  M
  CAAAGAGGTG GCTGACTAGA ATACGTACTT GGGTCCCATC CCCTCTCACC CCCCCCGTAC
  ACACACACAC TGAGTTGCTA CTTTTTTTAT ATCTTGTTTT                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss60349751	NES15850815	PERLEGEN	MM_PANEL2	f	SNP	A	C	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs47870167					SNP	A	C	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60349751	NES15850815	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:178047683 () rs orientation: forward

Symbol	Name	Function Class
Desi2	desumoylating isopeptidase 2	Intron
Rr424085	regulatory region 424085	within coordinates