rs47870597 SNP Detail

Summary

• ID
  rs47870597
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:75181819 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GAGAAATTTT ATGCAGAGAA AACGCTCACA TGGAGTCTTC
  TATCATAGAG ATATGTGGTT TCCTAGACAT CTGTGGTCAC TGGACATTGT TCAGCCAGAC
  C
  TTAAAATACC TCACCTCTGT CAACAGTCCA CCACCAGGAT CCATGAGATT GCAGCATGAC
  CCTAGCACCA GGCTGCACAC AGCAGTGAGG TTTTGAAAGG G                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss146766288	ENSMUSSNP901230	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs47870597					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:75181819 () rs orientation: forward

Symbol	Name	Function Class
Gm39857	predicted gene, 39857	within coordinates
Igs15	intergenic site 15	within coordinates
Rr559469	regulatory region 559469	within coordinates
Rr559470	regulatory region 559470	913 bp proximal