rs47873344 SNP Detail

Summary

• ID
  rs47873344
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:69470772 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    aagagaact ttctgctctt ctgaaaggcc
  cacatgttca gttccctgta cctacatcag gaggctcaca accccaggga attcatcatc
  tgcttctggt ctctgagggc accctcactc aagtgacata cattcaaaca catacTCAAC
  R
  CACACACATA CATGAAGTAA ATCTTTTTAA TCAGTTCTTT TATAAGATAG GTGTcaccta
  taatcccagt actcagaagg ttgagtaaaa agagtcacta tatgttcaaa gttagtctgg
  gacctataac gggttccagg atagcctggg                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss144642412	ENSMUSSNP5502572	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G		A
ss319781369	CHEV_1_69478187	CHEVERUD	SCREENING_POP	f	SNP				A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs47873344					SNP	G	G	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:69470772 () rs orientation: forward

Symbol	Name	Function Class
Gm28497	predicted gene 28497	within coordinates
Gm69966	predicted gene, 69966	700 bp upstream