rs47875304 SNP Detail

Summary

• ID
  rs47875304
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:118621010 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATCAGGGCC ACTGATAATA
  TTCAGGCTTA AAAAAAATAA TAAAAAGTAG GGGGTGGAGA AATGGACCAG TGGTTAAGAG
  CATTACTGCT ATTCCAGAAG AGGTGGGTTC AATTCTCAGC ACCTATGTGA TGGCTCACAA
  CCATTTATAA GTTCAGTTTC AGGGAATCAG AAACCCTCTG TGAGCACCGG GCACAAAAGT
  G
  GTGCACATAC CAGCAGGTGA AACACCCATA GATATAACAT AATAGTAATT ATAAGTAAAT
  AAACACAAAA GTCAAATGCA AAAACAAACT CAAATTTGAG AGGGTAAAAA TAGTATGTCT
  ACCTCATCTC TCAGGAAGCA GAATCTGAAA GATCACGAAC TTGAGACCAG ATTAGGCCAC
  ATAGTGACTC TCTGTCTCAA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss138901135	ENSMUSSNP79505	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs47875304					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:118621010 () rs orientation: forward

Symbol	Name	Function Class
Gm59652	predicted gene, 59652	within coordinates
Rr387829	regulatory region 387829	1593 bp upstream
Tssr118148	transcription start site region 118148	584 bp downstream