rs47875945 SNP Detail

Summary

• ID
  rs47875945
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:48032839 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCAGAATT TATAATTCTT
  TTTTGTTTTG TTTTGTTTTT CGAGACAGGG TTTCTCTGTG TAGCCCTGGC TGTCCTGGAA
  CTCACTTTGT AGACCAGGCT GGCCTCGAAC TCAGAAATCC GCCTGCCTCT GCCTCCCGAG
  TGCTGGGATT AAAGGCGTGC ACCACCATGC CTAGCTCAGA ATTCCTAATT CTTATTTAGA
  M
  AATTTAAAAA CATTTTTTGT TTACATATTT TGTACATGTG TACCATAGCA CATGCGTAGA
  GAGCAGAAGA CAATCTGTGG GACAATCGGT TCTCTGGTTC TCTTCTTCCA CCAAGCGGGA
  CTAAAGGGAT GAAACTCAGG TCTTTAACAT TAACAGCTCA TGCTTTCATC CCAGTATTCA
  GAATTAAAAC AAAACAAAAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145708736	ENSMUSSNP1825473	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47875945					SNP	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:48032839 () rs orientation: forward

Symbol	Name	Function Class
D17Dcr12	DNA Segment, Chr 17, Derry C. Roopenian 12	674 bp proximal
D17Mit66	DNA segment, Chr 17, Massachusetts Institute of Technology 66	661 bp proximal