rs47876359 SNP Detail

Summary

• ID
  rs47876359
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:81150828 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGAAAAAGTC AATGAAGCAG ACGAAGAAGC AGCTGCCTGA
  ATAGGTGATG GCTGAGCTAT GCCAGGGACA TACTGTGATA GACAACCGGG ATCCTCAAAT
  S
  GTCTAGGAAA ACAAAGCAAG CTGGCAGCCA TTCAGTCACC AGAGTCTTAG GAGGAACTAA
  CTCCCTTAGA GACACCGCAA GAAGAAAGAA GAGTGAGTG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss135391226	ENSMUSSNP1744426	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C
ss320814704	CHEV_3_81047443	CHEVERUD	SCREENING_POP	f	SNP			C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs47876359					SNP	G	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:81150828 () rs orientation: forward

Symbol	Name	Function Class
Rr578700	regulatory region 578700	within coordinates