rs47881951 SNP Detail

Summary

• ID
  rs47881951
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:100854402 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCCA GCTGGAAGCT CTCCATTCCC
  S
  AGCTGAGGCA GAATCATGTG AACTC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss137997082	ENSMUSSNP205508	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C
ss324138823	CHEV_12_102126353	CHEVERUD	SCREENING_POP	f	SNP			C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs47881951					SNP	G	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:100854402 () rs orientation: forward

Symbol	Name	Function Class
Gm36572	predicted gene, 36572	within coordinates
Gpr68	G protein-coupled receptor 68	within coordinates
Rr471362	regulatory region 471362	within coordinates
Rr471363	regulatory region 471363	223 bp distal
Tssr117330	transcription start site region 117330	279 bp upstream
Tssr117331	transcription start site region 117331	256 bp upstream
Tssr117332	transcription start site region 117332	242 bp upstream
Tssr117333	transcription start site region 117333	207 bp upstream
Tssr117334	transcription start site region 117334	185 bp upstream
Tssr117335	transcription start site region 117335	106 bp upstream
Tssr117336	transcription start site region 117336	62 bp upstream