rs47886459 SNP Detail

Summary

• ID
  rs47886459
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:32602351 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGATAAAGA AATCCACCAC TTCGTCTCTG CTTCTTCATC
  TCCAGAGTGG GGCACGTCTT GTGGGTGGAC TGACTTGGCA CTTAAAAATG AAGGTGAGCG
  R
  TCATGGGGAG GGTGGAAAAG ACTTCACAGA GAAATTATTT GAGTGTAAAA TTCAAGCCAT
  ACCTACAGGA AAATCCTTTT TGAAGTTTGG AATTGTTTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss136249559	ENSMUSSNP2730835	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47886459					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:32602351 () rs orientation: forward

Symbol	Name	Function Class
Ets1	E26 avian leukemia oncogene 1, 5' domain	within coordinates
Rr199954	regulatory region 199954	1050 bp proximal
Rr203547	regulatory region 203547	1744 bp proximal