rs47887176 SNP Detail

Summary

• ID
  rs47887176
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:69661441 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTTG GCTTCCAGAG CCTTTGCCCA
  C
  GTCAGTTCCT AAGTCCTGAC ATCAC                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss144563367	ENSMUSSNP3602323	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss324404656	CHEV_13_69652200	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47887176					SNP	C	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:69661441 () rs orientation: forward

Symbol	Name	Function Class
Gm48676	predicted gene, 48676	678 bp upstream
Rr277031	regulatory region 277031	1560 bp proximal
Tent4a	terminal nucleotidyltransferase 4A	within coordinates