rs47896073 SNP Detail

Summary

• ID
  rs47896073
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:135107904 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAAGAGGCA GAAGCCGACA ttatgttgtt
  ttgagacagg atctcactat tatatagccc tggctggcct ggaactcact atgcagagca
  gtctgacctc agactgacag gagatctacc tgcttctgtt tcctgagggc tgagacttga
  K
  actgggcgac accatgacca gcAGCAGGCA GTATTTCACT GCCTCCTAGA ACTTTGGCAA
  GAGGATCTGG Cagcccggtg tggtggcaca cgcccttaat cccagcactt ggaaggcaga
  ggcaggcaaa tttctgagtt caaggccacc                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319988324	CHEV_1_137076743	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs47896073					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135107904 () rs orientation: forward

Symbol	Name	Function Class
Rr419094	regulatory region 419094	235 bp distal
Rr419095	regulatory region 419095	496 bp proximal
Tssr13831	transcription start site region 13831	720 bp downstream