rs47899073 SNP Detail

Summary

• ID
  rs47899073
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:156556750 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTTCTCTT TAAGCTCTTA
  TCCAAAGGAG GCAGGCCTTG CCCAAGTCTA TCTGCACACG GGAAGTCACT CTAGGTGGAT
  TTCCTTGGGA GTCCTGACCC ACGCAGAATC CAGGCTCCTT TTCCAATCCT CCTCTAAGAG
  TTTGCTCATC CTTTCTCTCC CTGCTTGGTC CTGGGGCCAA CGTGATATCT CTTGGTCGTT
  R
  CGCAGTCACA CTCTACATTG TGTACCATCT CAGTGGGGGA CAACAGCAAA CACTTAGGTA
  TGAGCTTGCC GATCAGCCGC CTTTGCCCAC TGTGTCCTAT ACCCTGGGCC CAAAAGCTGT
  TCAGGAGCCA GTGTCCCAGC CAGGCCATGT TTTCCCCATG GAGGTGGCAG AAGGATGGGA
  GGACAACCTC ATTTTGTCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148081031	ENSMUSSNP1484435	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
ss320581494	CHEV_2_156540566	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47899073					SNP	A	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156556750 () rs orientation: forward

Symbol	Name	Function Class
4930405A21Rik	RIKEN cDNA 4930405A21 gene	within coordinates
Dlgap4	DLG associated protein 4	within coordinates